Extinctions

The causes of extinction are (mostly) fairly obvious, and we touched on one of the largest ones all ready - habitat destruction and conversion. But let's spend a little time reminding ourselves what the causes of extinction are, because knowing those causes helps us better to understand their consequences. Extinction of a species may come suddenly when an otherwise healthy species is wiped out completely, as when toxic pollution renders its entire habitat unlivable; or may occur gradually over thousands or millions of years, such as when a species gradually loses out competition for food to better adapted competitors.

Genetic and demographic causes:
Population genetics and demographic phenomena affect the evolution, and therefore the risk of extinction, of species. Species with small populations are much more vulnerable to these types of effects. Natural selection acts to propagate beneficial genetic traits and eliminate weaknesses. It is nevertheless possible for a deleterious mutation to be spread throughout a population through the effect of genetic drift.
A diverse or "deep" gene pool gives a population a higher chance of surviving an adverse change in conditions. Effects that cause or reward a loss in genetic diversity can increase the chances of extinction of a species. Population bottlenecks can dramatically reduce genetic diversity by severely limiting the number of reproducing individuals and make inbreeding more frequent. The founder effect can cause rapid, individual-based speciation and is the most dramatic example of a population bottleneck.

Habitat degradation:
Habitat degradation through toxicity can kill off a species very rapidly, by killing all living members through contamination or sterilizing them. It can also occur over longer periods at lower toxicity levels by affecting life span, reproductive capacity, or competitiveness. Habitat degradation can also take the form of a physical destruction of niche habitats. The widespread destruction of tropical rainforests and replacement with open pastureland is widely cited as an example of this; elimination of the dense forest eliminated the infrastructure needed by many species to survive. For example, a fern that depends on dense shade for protection from direct sunlight can no longer survive without forest to shelter it. Another example is the destruction of ocean floors by bottom trawling.
Diminished resources or introduction of new competitor species also often accompany habitat degradation. Global warming has allowed some species to expand their range, bringing unwelcome competition to other species that previously occupied that area. Sometimes these new competitors are predators and directly affect prey species, while at other times they may merely outcompete vulnerable species for limited resources. Vital resources including water and food can also be limited during habitat degradation, leading to extinction.

Predation, competition, and disease:
Humans have been transporting animals and plants from one part of the world to another for thousands of years, sometimes deliberately (e.g., livestock released by sailors onto islands as a source of food) and sometimes accidentally (e.g., rats escaping from boats). In most cases, such introductions are unsuccessful, but when they do become established as an invasive alien species, the consequences can be catastrophic. Invasive alien species can affect native species directly by eating them, competing with them, and introducing pathogens or parasites that sicken or kill them or, indirectly, by destroying or degrading their habitat. Human populations may themselves act as invasive predators. According to the "overkill hypothesis", the swift extinction of the megafauna in areas such as New Zealand, Australia, Madagascar and Hawaii resulted from the sudden introduction of human beings to environments full of animals that had never seen them before, and were therefore completely unadapted to their predation techniques.

Coextinction:
Coextinction refers to the loss of a species due to the extinction of another; for example, the extinction of parasitic insects following the loss of their hosts. Coextinction can also occur when a species loses its pollinator, or to predators in a food chain who lose their prey. According to Lian Pih Koh , "Species coextinction is a manifestation of the interconnectedness of organisms in complex ecosystems ... While coextinction may not be the most important cause of species extinctions, it is certainly an insidious one"

Mass extinctions:
There have been at least five mass extinctions in the history of life, and four in the last 3.5 billion years in which many species have disappeared in a relatively short period of geological time. The most recent of these, the K-T extinction 65 million years ago at the end of the Cretaceous period, is best known for having wiped out the non-avian dinosaurs, among many other species.